PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_8183g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 407aa    MW: 44715.4 Da    PI: 7.9357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_8183g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.8e-12259306455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +h+ +Er RR++i ++++ L+ l+P +    sk  sKa +Le+ ++Y++sLq
  MA_8183g0010 259 SHSLAERVRRQKISDRMNVLQNLIPGC----SKLTSKALVLEEIINYVQSLQ 306
                   8*************************9....555*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.97E-11253310No hitNo description
SuperFamilySSF474591.57E-16253320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16255316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.783255305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-9259306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-11261311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MTAFSNYYRI FQESVGITSP ISDSQDTKSQ YNVTNHLADQ QYIKFAPVDG LTSSDSCEAI  60
TTQAIALRPG SSAAEKALLY LYESPTDSLR QQEIINHGMI NDEQVAATAI YGRSVGVDDG  120
DRAVYPTPKS TEREEKKDCD ATNLLFNTPG DGSGMKAPLA KINTACWRMK KRKTDPSVRR  180
SVLEKNVPVL LKKPKRGICK SSPNSSAFSA HGDNSKRKLD VISRDPLELL FNIVKDEQKA  240
ESEKDYIHVR ARRGQATDSH SLAERVRRQK ISDRMNVLQN LIPGCSKLTS KALVLEEIIN  300
YVQSLQSQVE ILSMKLASIT PLCAFDQQNT GHLSRAALPD PMVAYGTSPC CVDRANTVAQ  360
QQTPGTFIEE CSTKLFSTTN GGTVSVRAWS PSLDQTLVGL SQLDASE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1114900.0BT111490.1 Picea glauca clone GQ03238_H01 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-39bHLH family protein